The detailed information of tRNA gene sequence


Sequence ID>WENV180097371
Genome IDMTBK01184721
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 923
End posion on genome 848
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
caacctgcgt
tRNA gene sequence 
CTCCGCGTAGCTCAGGGGATAGAGCGACCGCCTCCTAAGCGGTAGGTCGACGGTTCGAGT
CCGTCCGTGGAGGCCA
Downstream region at tRNA end position 
ttgcatttcc
Secondary structure (Cloverleaf model)
>WENV180097371	Arg	CCT
                   t      GCCA ttgcatttcc
                     C - G
                     T - A
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     C T G C C     A
      G G A        A      | | | | |     G
    G       C T C G       G A C G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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