The detailed information of tRNA gene sequence


Sequence ID>WENV180097372
Genome IDMTBK01184729
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1446
End posion on genome 1373
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cccaacaatt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGCGCCACGTTCGGGACGTGGAGGCCGAAGGTTCGAGT
CCTTTCACCCCGACtt
Downstream region at tRNA end position 
tttattctcc
Secondary structure (Cloverleaf model)
>WENV180097372	Pro	CGG
                   t      ACtt tttattctcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G A A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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