The detailed information of tRNA gene sequence


Sequence ID>WENV180097389
Genome IDMTBK01186036
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1104
End posion on genome 1029
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atatcttaga
tRNA gene sequence 
CGCGAGGTAGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCGAAT
CCTTCCCTCGCTACCA
Downstream region at tRNA end position 
ttttttaaca
Secondary structure (Cloverleaf model)
>WENV180097389	fMet	CAT
                   a      ACCA ttttttaaca
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | | | | |     G
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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