The detailed information of tRNA gene sequence


Sequence ID>WENV180097390
Genome IDMTBK01186036
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 977
End posion on genome 901
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catataatcg
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCGTCGGAATCATAATCCGCAGGTCCGGGGTTCAAA
TCCCTGCACCGCTACCA
Downstream region at tRNA end position 
aaaaatgcgc
Secondary structure (Cloverleaf model)
>WENV180097390	Met	CAT
                   g      ACCA aaaaatgcgc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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