The detailed information of tRNA gene sequence


Sequence ID>WENV180097394
Genome IDMTBK01186409
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1682
End posion on genome 1607
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctacaaaaaa
tRNA gene sequence 
CGGGGTATAGTGTAGTCCGGTTATCGCGCCTGCTTTGGGAGCAGGAGATCGCAAGTTCGA
ATCTTGCTACCCCGACtg
Downstream region at tRNA end position 
aaaaataagc
Secondary structure (Cloverleaf model)
>WENV180097394	Pro	TGG
                   a      ACtg aaaaataagc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G T T C     A
    C T G A        A      | | | | |     G
  C         T G T G       G C A A G     C
  G           | + |                 T T
  G         T C G C
    T T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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