The detailed information of tRNA gene sequence


Sequence ID>WENV180097401
Genome IDMTBK01186771
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 983
End posion on genome 894
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnatgcag
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTTGAATAGGACACACTCGAAATGTGTTATTCGGGGTTTTCCT
GAATCGTGGGTTCGAATCCCACCCTCTCCGtat
Downstream region at tRNA end position 
aaaataaaat
Secondary structure (Cloverleaf model)
>WENV180097401	Ser	CGA
                   g      Gtat aaaataaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G         | | |                 T T
    T       A T A G
      T G A        G     TATTCGGGGTTTTCCTGAATC
                    A - T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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