The detailed information of tRNA gene sequence


Sequence ID>WENV180097403
Genome IDMTBK01187016
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 666
End posion on genome 592
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgtttgaat
tRNA gene sequence 
GGGGTTGTAGTTCAACTGGTTAGAGCACCGGCCTGTCACGCCGGAAGTTGCGGGTTCGAG
CCCCGTCAATCCCGCat
Downstream region at tRNA end position 
aatggtagcc
Secondary structure (Cloverleaf model)
>WENV180097403	Asp	GTC
                   t      GCat aatggtagcc
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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