The detailed information of tRNA gene sequence


Sequence ID>WENV180097405
Genome IDMTBK01187447
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1243
End posion on genome 1159
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ttataattgt
tRNA gene sequence 
GTCGGAGTGGTGGAATGGGCAGACACGTACGTTTGAGGGGCGTATCCTTAACCGGGTGCG
GGTTCAAGTCCCGCCTCCGACACCA
Downstream region at tRNA end position 
gccttatgcg
Secondary structure (Cloverleaf model)
>WENV180097405	Leu	GAG
                   t      ACCA gccttatgcg
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TCCTTAACCGGGT
                    T - A
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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