The detailed information of tRNA gene sequence


Sequence ID>WENV180097406
Genome IDMTBK01187545
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2769
End posion on genome 2694
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttctgttcat
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCGAAT
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
taaatttaat
Secondary structure (Cloverleaf model)
>WENV180097406	Ala	TGC
                   t      ACCA taaatttaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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