The detailed information of tRNA gene sequence


Sequence ID>WENV180097409
Genome IDMTBK01187753
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 629
End posion on genome 554
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataatgttgc
tRNA gene sequence 
AGGACAGTAGTTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGATT
CCTGCCTGTCCTGCCA
Downstream region at tRNA end position 
cattcattct
Secondary structure (Cloverleaf model)
>WENV180097409	Trp	CCA
                   c      GCCA cattcattct
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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