The detailed information of tRNA gene sequence


Sequence ID>WENV180097413
Genome IDMTBK01187755
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 326
End posion on genome 414
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcataatat
tRNA gene sequence 
GGAGAGGTATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGGGTGAAAGCCCG
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agtggagaag
Secondary structure (Cloverleaf model)
>WENV180097413	Ser	TGA
                   t      GCCA agtggagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGGGTGAAAGCCCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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