The detailed information of tRNA gene sequence


Sequence ID>WENV180097418
Genome IDMTBK01187878
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 453
End posion on genome 377
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gatggcccat
tRNA gene sequence 
GGGCGAGTAGCTCAGCTGGTTAGAGCACCTGCCTTACAAGCAGGGGGTCAGGGGTTCGAG
TCCCTTTTCGCCCACCA
Downstream region at tRNA end position 
ccgaaaaccc
Secondary structure (Cloverleaf model)
>WENV180097418	Val	TAC
                   t      ACCA ccgaaaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T          T G
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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