The detailed information of tRNA gene sequence


Sequence ID>WENV180097427
Genome IDMTBK01188291
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 754
End posion on genome 662
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaatagtc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGCCGAAGGAACCCGACTGGAAATCGGGTAGGCGGCTAAACCCC
GCCTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
acccggtacg
Secondary structure (Cloverleaf model)
>WENV180097427	Ser	GGA
                   c      GCCA acccggtacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        A     TAGGCGGCTAAACCCCGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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