The detailed information of tRNA gene sequence


Sequence ID>WENV180097428
Genome IDMTBK01188307
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 863
End posion on genome 773
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcaaacctt
tRNA gene sequence 
GGAGAAGTACCCAAGAGGTCGAAGGGGACGGTTTGCTAAACCGTTAGTGGGGGCAACTCC
AGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
aaaaagtggg
Secondary structure (Cloverleaf model)
>WENV180097428	Ser	GCT
                   t      GCCA aaaaagtggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TAGTGGGGGCAACTCCAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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