The detailed information of tRNA gene sequence


Sequence ID>WENV180097429
Genome IDMTBK01188319
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 201
End posion on genome 275
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgggcgcact
tRNA gene sequence 
GCCTCCGTAGCTCAGTTGGATAGAGCAAGGGCCTTCTAATCCCTAGGTCGCAGGTTCGAT
TCCTGCCGGGGGCGCtg
Downstream region at tRNA end position 
tgtgatgtct
Secondary structure (Cloverleaf model)
>WENV180097429	Arg	TCT
                   t      GCtg tgtgatgtct
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    C   T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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