The detailed information of tRNA gene sequence


Sequence ID>WENV180097434
Genome IDMTBK01188391
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1567
End posion on genome 1480
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atcgaattgg
tRNA gene sequence 
GGAGAGATGACCGAGTTGGAAAGGAGCATGCCTGGAAAGCGTGTAAGGTCGAAAGGCCCC
GTGGGTTCGAGTCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaatataa
Secondary structure (Cloverleaf model)
>WENV180097434	Ser	GGA
                   g      GCCA ttaaatataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C A C C C     A
      T G A        G      | | | | |     G
    T       G C C A       G T G G G     C
    G         | |                   T T
    G       A G G A
      A A          G     TAAGGTCGAAAGGCCCC
                    C - G
                    A - T
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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