The detailed information of tRNA gene sequence


Sequence ID>WENV180097440
Genome IDMTBK01188763
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4041
End posion on genome 4114
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aagggagagc
tRNA gene sequence 
GCCCCTGTAGCTCAGACTGGGAGAGCGCCAGACTGAAGATCTGGTTGTCCCCGGTTCAAA
TCCGGGCGGGGGCAtca
Downstream region at tRNA end position 
ctcaatatgt
Secondary structure (Cloverleaf model)
>WENV180097440	Phe	GAA
                   c      Atca ctcaatatgt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G G C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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