The detailed information of tRNA gene sequence


Sequence ID>WENV180097444
Genome IDMTBK01189139
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 152
End posion on genome 79
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taaaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAGAGGCCGTACGTTCGAGT
CGTACCCCCGCTACgc
Downstream region at tRNA end position 
tgaaagtcag
Secondary structure (Cloverleaf model)
>WENV180097444	fMet	CAT
                   t      ACgc tgaaagtcag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A T G C     A
      T G A        G      | | | | |     G
    T       C G A G       G T A C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGCC
                    T + G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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