The detailed information of tRNA gene sequence


Sequence ID>WENV180097446
Genome IDMTBK01189552
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 488
End posion on genome 412
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcacacgcac
tRNA gene sequence 
TCCCCGGTAGCTCAATCGGCAGTAGCGGCTGGCTGTTAACCAGTAGGTTGCAAGTTCGAG
TCTTGCCCGGGGAGCCA
Downstream region at tRNA end position 
gatatttccg
Secondary structure (Cloverleaf model)
>WENV180097446	Asn	GTT
                   c      GCCA gatatttccg
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T T C     A
      T A A        A      | | | | |     G
    C       C T C G       G C A A G     C
    G         | | |                 T T
    G       T A G C
      C A G        G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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