The detailed information of tRNA gene sequence


Sequence ID>WENV180097453
Genome IDMTBK01189760
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 435
End posion on genome 359
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggcagggcat
tRNA gene sequence 
CGGGGTATAGCGCAGCCTGGTAGCGCGACAGTTTTGGGAACTGTAGGTCGCAGGTTCAAA
TCCTGCTGCCCCGACCA
Downstream region at tRNA end position 
tacgccgcac
Secondary structure (Cloverleaf model)
>WENV180097453	Pro	TGG
                   t      ACCA tacgccgcac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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