The detailed information of tRNA gene sequence


Sequence ID>WENV180097455
Genome IDMTBK01189991
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 190
End posion on genome 94
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
ctacttgcac
tRNA gene sequence
GGGGGTAGATGGGTTCTGGTGTGCCCTCCGGTCTTCAAAACCGGTATGGGGGGTTAGTAG
CTTCCCGGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position
acaaaaactt
Secondary structure (Cloverleaf model)
>WENV180097455	SeC	TCA
                   c      GCCA acaaaaactt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     TATGGGGGGTTAGTAGCTTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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