The detailed information of tRNA gene sequence


Sequence ID>WENV180097457
Genome IDMTBK01190073
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5274
End posion on genome 5348
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcaacattat
tRNA gene sequence 
TCCCGGGTAGCGCAGCGGTAGCGCAGTTGGCTGTTAACCAATTGGTCGTGGGTTCGAATC
CCACCCCGGGAGCCA
Downstream region at tRNA end position 
gcgtgtacga
Secondary structure (Cloverleaf model)
>WENV180097457	Asn	GTT
                   t      GCCA gcgtgtacga
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     G
      C     C G C G       G T G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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