The detailed information of tRNA gene sequence


Sequence ID>WENV180097465
Genome IDMTBK01190543
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1229
End posion on genome 1305
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcccgtgt
tRNA gene sequence 
GGCGGAGTAGCTCAGTAGGTTAGAGCATGCGGCTCATATCCGCAGAGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
caacttcctt
Secondary structure (Cloverleaf model)
>WENV180097465	Met	CAT
                   t      ACCA caacttcctt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GAGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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