The detailed information of tRNA gene sequence


Sequence ID>WENV180097470
Genome IDMTBK01190814
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 543
End posion on genome 619
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aagacattaa
tRNA gene sequence 
GCGTGTTTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGCCAGGAGTTCGAA
TCTCTTAACACGCACCA
Downstream region at tRNA end position 
taatgtnnnn
Secondary structure (Cloverleaf model)
>WENV180097470	Arg	TCT
                   a      ACCA taatgtnnnn
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A
                     T - A          T A
                    T     T T C T C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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