The detailed information of tRNA gene sequence


Sequence ID>WENV180097478
Genome IDMTBK01191072
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1781
End posion on genome 1707
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggcatattac
tRNA gene sequence 
GGGGGCGTAGATCAATGGTTAGATCGCCACTCTGTCACAGTGGAGGTTGCCGGTTCGAGT
CCGGTCGTCCCCGCCt
Downstream region at tRNA end position 
cacaccgctc
Secondary structure (Cloverleaf model)
>WENV180097478	Asp	GTC
                   c      GCCt cacaccgctc
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T A A        A      + | | | |     G
    G       C T A G       G C C G G     C
    G       | | | |                 T T
    T       G A T C
      T A          G     AGGTT
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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