The detailed information of tRNA gene sequence


Sequence ID>WENV180097489
Genome IDMTBK01191704
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 592
End posion on genome 689
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcctctctc
tRNA gene sequence 
GGAAGTGCGCAGGTCACTGGTGGGCCTCCTGGACTTCAAATCCAGTGTGGGGGGCTGATA
CCCTCCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
attgatccga
Secondary structure (Cloverleaf model)
>WENV180097489	SeC	TCA
                   c      GCCA attgatccga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGGGCTGATACCCTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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