The detailed information of tRNA gene sequence


Sequence ID>WENV180097496
Genome IDMTBK01191956
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 257
End posion on genome 333
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cagggcagag
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCGGGGTTCAAG
TCCCTGATGGCCCACCA
Downstream region at tRNA end position 
aaatgtaaat
Secondary structure (Cloverleaf model)
>WENV180097496	Ile2	CAT
                   g      ACCA aaatgtaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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