The detailed information of tRNA gene sequence


Sequence ID>WENV180097511
Genome IDMTBK01193055
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1219
End posion on genome 1293
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gccacaaaaT
tRNA gene sequence 
GGTCCTGTAGCTCAATTGGCAGAGCAAGCGCCTCTTAAGCGTTAGGTTCTCGGTTCGAGT
CCGAGCAGGATCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180097511	Lys	CTT
                   T      ACnn nnnnnnnnnn
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G A G C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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