The detailed information of tRNA gene sequence


Sequence ID>WENV180097517
Genome IDMTBK01193609
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2160
End posion on genome 2085
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctataggtat
tRNA gene sequence 
GGGGGCGTAGTTCAGTTGGGAGAATGTTTGACTGGCAGTCAAGAGGTCAGGGGTTCGAAT
CCCCTCGTCTCCACCA
Downstream region at tRNA end position 
tccggacatc
Secondary structure (Cloverleaf model)
>WENV180097517	Ala	GGC
                   t      ACCA tccggacatc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T T G       A G G G G     C
    G       | | | +                 T T
    G       G A A T
      G A          G     AGGTC
                    T + G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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