The detailed information of tRNA gene sequence


Sequence ID>WENV180097519
Genome IDMTBK01193658
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 169
End posion on genome 244
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccagccatag
tRNA gene sequence 
GATCCACTAGCTCAGTCGGTAGAGCATCTGACTTTTAATCAGGGGGTCTGGGGTTCGAAT
CCCCAGTGGATCACCA
Downstream region at tRNA end position 
gcggagcctt
Secondary structure (Cloverleaf model)
>WENV180097519	Lys	TTT
                   g      ACCA gcggagcctt
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     A - T
                     C - G          T A
                    T     A C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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