The detailed information of tRNA gene sequence


Sequence ID>WENV180097523
Genome IDMTBK01193957
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11
End posion on genome 87
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atattgaaca
tRNA gene sequence 
GGGTGATTAGCTCAGCTGGTTAGAGCGCTACGTTCACATCGTAGAGGTCACTGGTTCGAA
TCCAGTATCACCCACCA
Downstream region at tRNA end position 
cttttttaaa
Secondary structure (Cloverleaf model)
>WENV180097523	Val	CAC
                   a      ACCA cttttttaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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