The detailed information of tRNA gene sequence


Sequence ID>WENV180097525
Genome IDMTBK01194003
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 460
End posion on genome 387
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttacgaaaat
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTATGCCGCGGCCTGCAAAGCCGTTTAGACCAGTTCGACTCT
GGTTCGCGCCTCCA
Downstream region at tRNA end position 
aatattgtgc
Secondary structure (Cloverleaf model)
>WENV180097525	Cys	GCA
                   t      TCCA aatattgtgc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     T G G T C     A
        G A        A      | | | | |     G
      C     A A C G       A C C A G     C
      G       | | |                 T T
      G     A T G C
        T T        C     TTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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