The detailed information of tRNA gene sequence


Sequence ID>WENV180097530
Genome IDMTBK01194358
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 45
End posion on genome 139
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tactttaatc
tRNA gene sequence 
GGAGAGATGACCGAGAGGCCGAAGGTGGTTGCCTGCTAAGCAATTGAGCGGATTATAAGT
CCGTTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttttgtt
Secondary structure (Cloverleaf model)
>WENV180097530	Ser	GCT
                   c      GCCA tttttttgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGAGCGGATTATAAGTCCGTTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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