The detailed information of tRNA gene sequence


Sequence ID>WENV180097531
Genome IDMTBK01194363
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4349
End posion on genome 4437
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttgctggac
tRNA gene sequence 
GGAGGCGTGTCCGAACAGGCTAAGGAGCCGGTCTCGAAAATCGGTGGACCTTACGGTCCT
TGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
ttttatttca
Secondary structure (Cloverleaf model)
>WENV180097531	Ser	CGA
                   c      GCCA ttttatttca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    A       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGACCTTACGGTCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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