The detailed information of tRNA gene sequence


Sequence ID>WENV180097534
Genome IDMTBK01194793
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 45
End posion on genome 120
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
catctattac
tRNA gene sequence 
GGGGCTTTAGCTCAGCTGGAAGAGCGCCTGCCTTGCAAGCAGGAGGTCGACGGTTCGATC
CCGTTAAGCTCCACCA
Downstream region at tRNA end position 
attttgcttt
Secondary structure (Cloverleaf model)
>WENV180097534	Ala	TGC
                   c      ACCA attttgcttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          C T
                    T     T T G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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