The detailed information of tRNA gene sequence


Sequence ID>WENV180097535
Genome IDMTBK01194793
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 177
End posion on genome 253
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgggcttgat
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGCTAGAGCGTGCGGTTCATACCCGCAAGGTCGAGGGTTCAAG
TCCCCCCGCCGCTACCA
Downstream region at tRNA end position 
gaggggaccc
Secondary structure (Cloverleaf model)
>WENV180097535	Met	CAT
                   t      ACCA gaggggaccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C C C C C     A
      C G A        A      |   | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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