The detailed information of tRNA gene sequence


Sequence ID>WENV180097537
Genome IDMTBK01194793
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 354
End posion on genome 444
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attacatgac
tRNA gene sequence 
GGAGAAATACCCAAGTCTGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGTGTAAAAGC
CGCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
tttgaaacaa
Secondary structure (Cloverleaf model)
>WENV180097537	Ser	TGA
                   c      GCCA tttgaaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGTGTAAAAGCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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