The detailed information of tRNA gene sequence


Sequence ID>WENV180097538
Genome IDMTBK01194793
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 459
End posion on genome 534
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaacaaacat
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAAT
CCTTCCCCCGCAACCA
Downstream region at tRNA end position 
gataaggtcc
Secondary structure (Cloverleaf model)
>WENV180097538	fMet	CAT
                   t      ACCA gataaggtcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      |   | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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