The detailed information of tRNA gene sequence


Sequence ID>WENV180097540
Genome IDMTBK01194793
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 620
End posion on genome 695
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccgccatttt
tRNA gene sequence 
GGCTCTGTAGCTCAGTCGGTAGAGCAACGGACTGAAAATCCGTGTGTCACCAGTTCGATT
CTGGTCGGAGCCACCA
Downstream region at tRNA end position 
tttctatata
Secondary structure (Cloverleaf model)
>WENV180097540	Phe	GAA
                   t      ACCA tttctatata
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     T G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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