The detailed information of tRNA gene sequence


Sequence ID>WENV180097543
Genome IDMTBK01195200
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 557
End posion on genome 481
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aggttatgat
tRNA gene sequence 
GGTCGCTTAGCTCAGCCGGTTAGAGCGCTACGCTCACATCGTAGAGGTCGCTGGTTCGAG
TCCAGCAGCGACCACCA
Downstream region at tRNA end position 
tttacacatg
Secondary structure (Cloverleaf model)
>WENV180097543	Val	CAC
                   t      ACCA tttacacatg
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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