The detailed information of tRNA gene sequence


Sequence ID>WENV180097548
Genome IDMTBK01195346
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1842
End posion on genome 1767
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aagaggttat
tRNA gene sequence 
GCCGCGGTAGCTCAGTCGGTAGAGCAGCGGACTGAAAATCCGCGTGTCGCCAGTTCGATT
CTGGCCTGCGGCACCA
Downstream region at tRNA end position 
ctttcgagcg
Secondary structure (Cloverleaf model)
>WENV180097548	Phe	GAA
                   t      ACCA ctttcgagcg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          T T
                    T     C G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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