The detailed information of tRNA gene sequence


Sequence ID>WENV180097551
Genome IDMTBK01195346
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1545
End posion on genome 1469
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acaataatat
tRNA gene sequence 
GGGCGGTTAGCTCAGTCGGCTAGAGCGCTTGCTTGACATGCAAGAGGTCACAGGTTCAAG
TCCTGTACCGCCCACCA
Downstream region at tRNA end position 
tcgaagcata
Secondary structure (Cloverleaf model)
>WENV180097551	Val	GAC
                   t      ACCA tcgaagcata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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