The detailed information of tRNA gene sequence


Sequence ID>WENV180097553
Genome IDMTBK01195396
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 451
End posion on genome 527
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggaaatttt
tRNA gene sequence 
GGTGCGGTAGTTCAGTTGGTTAGAATATCGGCCTGTCACGCCGAGGGTCGCGGGTTCGAG
TCCCGTCCGCACCGCCA
Downstream region at tRNA end position 
gagggagttc
Secondary structure (Cloverleaf model)
>WENV180097553	Asp	GTC
                   t      GCCA gagggagttc
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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