The detailed information of tRNA gene sequence


Sequence ID>WENV180097557
Genome IDMTBK01195793
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6987
End posion on genome 6895
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctgtaatgt
tRNA gene sequence 
GGAGGGTTGTCCGAGTTGGTTGAAGGAGCGCGACTGGAAATCGCGTGTACCCCTCAAAGG
GTATCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
aggctttcct
Secondary structure (Cloverleaf model)
>WENV180097557	Ser	GGA
                   t      GCCA aggctttcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T T G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TGTACCCCTCAAAGGGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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