The detailed information of tRNA gene sequence


Sequence ID>WENV180097561
Genome IDMTBK01196386
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 572
End posion on genome 647
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtcccccgc
tRNA gene sequence 
AGGGGTGTAGCACAATGGCTAGTGCAGCGGCCTCCAAAGCCGAAGGTTGGGGGTTCGAGT
CCCTCCACCCCTGCCA
Downstream region at tRNA end position 
ttcttttctt
Secondary structure (Cloverleaf model)
>WENV180097561	Trp	CCA
                   c      GCCA ttcttttctt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C A C G       G G G G G     C
    G       | | | |                 T T
    C       G T G C
      T A          A     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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