The detailed information of tRNA gene sequence


Sequence ID>WENV180097572
Genome IDMTBK01197248
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2553
End posion on genome 2627
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagtcccaga
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGCTAGAGCGCTTGCATGGCATGCAAGAGGTCGTCGGTTCGAC
TCCGTCATGGTCCACaa
Downstream region at tRNA end position 
ctattattta
Secondary structure (Cloverleaf model)
>WENV180097572	Ala	GGC
                   a      ACaa ctattattta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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