The detailed information of tRNA gene sequence


Sequence ID>WENV180097582
Genome IDMTBK01198219
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 422
End posion on genome 515
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcttagcgat
tRNA gene sequence 
GGGAATGGTTAGGTCCCGGTGGGCTTCCTGGTCTTCAAAATCAGTGTCGGGTCGCGTTGC
GAGCCGGGGTGGGTTCGACTCCCATCCATTCCCGttt
Downstream region at tRNA end position 
tgattcgagc
Secondary structure (Cloverleaf model)
>WENV180097582	SeC	TCA
                   t      Gttt tgattcgagc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | + |                 T T
    T       G C T T
      G G          C     TGTCGGGTCGCGTTGCGAGCCGGG
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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