The detailed information of tRNA gene sequence


Sequence ID>WENV180097585
Genome IDMTBK01198648
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12095
End posion on genome 12009
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcttatgtT
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGAAGGAGGCGGTCTTGAAAACCGTTGAGGCGCGAGTCTCC
GAGGGTTCGAATCCCCCTCTCTCCGGat
Downstream region at tRNA end position 
tggacaacgt
Secondary structure (Cloverleaf model)
>WENV180097585	Ser	TGA
                   T      GGat tggacaacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      |   | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGAGGCGCGAGTCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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