The detailed information of tRNA gene sequence


Sequence ID>WENV180097586
Genome IDMTBK01198648
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11985
End posion on genome 11897
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttcagtT
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGCCGAATCGGGCTCCCTGCTAAGGAGTTGACCTGGTAACGGGT
CCGGGGGTTCGAATCCCCCCCTCTCCGGat
Downstream region at tRNA end position 
tttttacaat
Secondary structure (Cloverleaf model)
>WENV180097586	Ser	GCT
                   T      GGat tttttacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGACCTGGTAACGGGTCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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