The detailed information of tRNA gene sequence


Sequence ID>WENV180097589
Genome IDMTBK01198648
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11670
End posion on genome 11584
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgtatttT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGATGGTGCACGCTTGGAAAGCGTGTGTGCCGAGAGGCACC
GGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
cccagccaac
Secondary structure (Cloverleaf model)
>WENV180097589	Ser	GGA
                   T      GTtt cccagccaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGTGCCGAGAGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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